Browse free open source Java Mathematics Software and projects below. Use the toggles on the left to filter open source Java Mathematics Software by OS, license, language, programming language, and project status.

  • 8 Monitoring Tools in One APM. Install in 5 Minutes. Icon
    8 Monitoring Tools in One APM. Install in 5 Minutes.

    Errors, performance, logs, uptime, hosts, anomalies, dashboards, and check-ins. One interface.

    AppSignal works out of the box for Ruby, Elixir, Node.js, Python, and more. 30-day free trial, no credit card required.
    Start Free
  • MicroStation by Bentley Systems is the trusted computer-aided design (CAD) software built specifically for infrastructure design. Icon
    MicroStation by Bentley Systems is the trusted computer-aided design (CAD) software built specifically for infrastructure design.

    Microstation enables architects, engineers, and designers to create precise 2D and 3D drawings that bring complex projects to life.

    MicroStation is the only computer-aided design software for infrastructure design, helping architects and engineers like you bring their vision to life, present their designs to their clients, and deliver their projects to the community.
    Learn More
  • 1
    Java/XML toolkit for research using Bayesian networks and other graphical models of probability (exact and approximate inference, structure learning, etc.)
    Leader badge
    Downloads: 7 This Week
    Last Update:
    See Project
  • 2
    Parallel Iterative Deconvolution is a multithreaded ImageJ plugin for iterative image deblurring.
    Downloads: 7 This Week
    Last Update:
    See Project
  • 3
    Parallel Spectral Deconvolution is a multithreaded ImageJ plugin for spectral image deblurring.
    Leader badge
    Downloads: 3 This Week
    Last Update:
    See Project
  • 4
    Discovery Manager for integrating components on CSF.
    Downloads: 0 This Week
    Last Update:
    See Project
  • Data management solutions for confident marketing Icon
    Data management solutions for confident marketing

    For companies wanting a complete Data Management solution that is native to Salesforce

    Verify, deduplicate, manipulate, and assign records automatically to keep your CRM data accurate, complete, and ready for business.
    Learn More
  • 5
    Algorithms for reaction mapping
    Algorithms that optimally & efficiently map atomic reactions. See 1) Atomic Reaction Mapping {Crabtree: amazon, b&n} 2) J. of Exp. Algorithmics, Vol 13 {Crabtree, Mehta} 3) J. Chem. Inf. Model., 2010, 50 (9), pp 1751–1756 {Crabtree, Mehta, Kouri}.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 6
    Bayesian Network tools in Java (BNJ) is an open-source suite of software tools for research and development using graphical models of probability. It is published by the Kansas State University Laboratory for Knowledge Discovery in Databases (KDD).
    Downloads: 0 This Week
    Last Update:
    See Project
  • 7
    IDL specified API for manipulating and processing CellML 1.0 and 1.1. Includes C++ implementation. Accessible from a C++ program, or from any language for which a CORBA language mapping is available Also, a Java wrapper of the API is available.
    Leader badge
    Downloads: 0 This Week
    Last Update:
    See Project
  • 8
    Mathematics, Chemistry and Bio-informatics semantic knowledge editor and simulation environment. It should serve as interactive science learning program or science classroom notebook and workshop.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 9
    FastPval is multiple stage p-value computing software that computes empirical p-values from a large set of permutated/resampled background data.
    Downloads: 0 This Week
    Last Update:
    See Project
  • Securden Privileged Account Manager Icon
    Securden Privileged Account Manager

    Unified Privileged Access Management

    Discover and manage administrator, service, and web app passwords, keys, and identities. Automate management with approval workflows. Centrally control, audit, monitor, and record all access to critical IT assets.
    Learn More
  • 10

    Fylogenetica

    Constructing level-1-networks consistent with a set of quartets

    This project is an implementation of an algorithm by J. Keijsper and R. Pendavingh. The goal of the algorithm is to construct a phylogenetic level-1-network that is consistent with a given set of quartets.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 11
    HmmSDK is a hidden Markov model (HMM) software development kit written in Java. It consists of core library of HMM functions (Forward-backward, Viterbi, and Baum-Welch algorithms) and toolkits for application development.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 12
    A polynomial-time algorithm for constructing level-2 phylogenetic networks from dense sets of rooted triplets.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 13
    A straight-forward Java implementation of a mixture model with pluggable mixture functions, e.g. a mixture of Gaussian functions. The number and dimensionality of the mixture functions is not limited. All critical calculations are performed in log-space.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 14
    Parallel HRRT Deconvolution is a multithreaded ImageJ plugin for motion correction of PET brain images.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 15
    http://ewi.utwente.nl/~biorange/rshell - The RShell project is a plugin for the Taverna workflow system. It enables one to execute R scripts within the Taverna workflow system. The RShell processor is built on the RServe project. For more info:
    Downloads: 0 This Week
    Last Update:
    See Project
  • 16
    Sage Bionetworks
    Opensource software projects for genetics and genomics from Sage Bionetworks.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 17
    This project has moved to http://code.google.com/p/synthetic/
    Downloads: 0 This Week
    Last Update:
    See Project
  • 18
    The Systems Biology Ontology project (SBO) goal is to develop controlled vocabularies and ontologies tailored specifically for the kinds of problems being faced in Systems Biology, especially in the context of computational modeling. !!!! Important Announcement !!!! We have moved the curation and development of Systems Biology Ontology (SBO) to a git-hub repository https://github.com/EBI-BioModels/SBO. Hence, this SourceForge SBO project has also been retired. Please use the Git-Hub issue tracker https://github.com/EBI-BioModels/SBO/issues to request the addition of new terms.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 19
    TM4 is a suite of applications for managing and analyzing microarray data. TM4 provides data storage and tracking, image analysis, normalization, data filtering, clustering and statistical analysis capabilities. Includes MADAM, Spotfinder, MIDAS, and MeV.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 20
    Wavelets At Work is a graphical tool (written in java) using wavelets in order to detect discontinuity of an input signal.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 21
    coalescent

    coalescent

    Software tool for Research in Computational Population Genetics

    Development of exact and approximate methods (Importance Sampling and MCMC based) for computing likelihoods under the standard population genetic models of mutation,migration & recombination. Project issues are mainatined at https://freecode4susant.atlassian.net/browse/COALESCENT
    Downloads: 0 This Week
    Last Update:
    See Project
  • 22
    The final build of this software now is distributed in R, embedded in "RedeR': an R/Bioconductor package for hierarchical and nested network analysis... more about RedeR: http://bioconductor.org/packages/2.9/bioc/html/RedeR.html
    Downloads: 0 This Week
    Last Update:
    See Project
  • 23
    genomemap
    A software framework to build maps for Neurospora crassa genome based on probabilistic models of meiotic recombination. A netbeans platform application is built to incorporate the computations. Project issues are mainatined at https://freecode4susant.atlassian.net/browse/GENOMEMAP
    Downloads: 0 This Week
    Last Update:
    See Project
  • 24
    gfit creates an interface between computational models and experimental data and provides tools for their analysis
    Downloads: 0 This Week
    Last Update:
    See Project
  • 25
    memesa-tools

    memesa-tools

    A collection of tools used in the enumeration of solution spaces

    This collection of tools forms the basis of a pipeline for the complete enumeration of the number of solutions present in a model that maximizes a single objective function.
    Downloads: 0 This Week
    Last Update:
    See Project
  • Previous
  • You're on page 1
  • 2
  • Next
MongoDB Logo MongoDB