Open Source Visual Basic for Applications (VBA) Bio-Informatics Software
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Visual Basic for Applications (VBA) Bio-Informatics Software
View 66 business solutionsBrowse free open source Visual Basic for Applications (VBA) Bio-Informatics Software and projects below. Use the toggles on the left to filter open source Visual Basic for Applications (VBA) Bio-Informatics Software by OS, license, language, programming language, and project status.
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Darwin_Test 3.1
Validate records from tables Darwincore 1.2 or 1.4
Darwin Test is a software application to validate and check records from tables in a Darwincore1.2 or Darwincore1.4 format. It also exports the previous formats to the Darwin Core Archive standard and allows the inverse process. -
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Controversial ideas of Williamson, Margulis & others suggest speciation by hybridizing might be more common than originally thought. Taking this concept to the nth degree & assuming that indeed, speciation mostly occurs by hybridizing events, not the accumulation of mutations or genetic drift, here is a catalogueoflife2gedcom converter. It allows the tree of life to be displayed as a human genealogy tree with hybridizing events depicted as "marriages." The idea then is that mutation accrual & genetic drift are the determining factors for "species maturation," not speciation itself. Unfortunately the Catalogue of Life Project, catalogueoflife.org, changed its database format more recently, so this converter only works on older versions of the data. In the last working version of the database, making the assumption that each taxonomic name, no matter what level, refers to an original real species & starting them all as female, over 2 million "species/persons" were generated.
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imDEV
Tools for multivariate data visualization, exploration and analysis.
You may also like some newer work: http://createdatasol.com/ Project imDEV is an application of RExcel, which seamlessly integrates Excel and R for tasks focused on multivariate data visualization, exploration, and analysis. Interactive modules for dimensional reduction (imPCA), prediction (imPLS), feature selection, analysis of correlation (imCorrelations) and generation of networked structures (imGraph) provide an integrated environment for systems level analysis of multivariate data. -
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BacterialChemotaxis
Computer Lesson and Simulation of Bacterial Chemotaxis
CSim3a.exe will install a Lesson and Simulation of Bacterial Chemotaxis. Bacterial Chemotaxis is the motion up or down the direction of an attractant or repelant of each bacteria. The simulation also demonstrates the bacterial mechanism of this utility. The Lesson also gives the Basic code used in the simulation. Installs as motility3a in c:/users/public/CSim3a -
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BIBMASTER is a database application to manage biodiversity projects. It's designed to make easier the compilation and management of taxa-level, specimen-level, nomenclatural and bibliographic information.
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BioWord
A Microsoft Word add-in for biological sequence manipulation
BioWord, a Microsoft Word add-in, allows instant access to most sequence manipulation needs, such as reverse-complementing, translating or FASTA formatting, and features a full suite of sequence search methods, pair-wise alignment and motif discovery. -
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CYZRLYZR is an open-source add-in for Microsoft(R) Excel(R) to analyze particle counts and size data generated by a MultiSizer 3 counter. It imports and analyze CSV files generated by Beckman-Coulter's MultiSizer 3 software.
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Catalogue of Life Converter
MS Access database converts the Catalogue of Life into a gedcom format
The primary driver of speciation may result from hybridization instead of the accumulation of mutations. The accumulation of mutations may instead be responsible for a "maturation" which may have real physical meaning rather than being an amorphous concept. Scientists such as Donald Williamson and Lynn Margulis have suggested similar ideas but perhaps not going as far as this project assumes. This software converted the Catalogue of Life, catalogueoflife.org, into a gedcom format. It no longer works due to the Catalogue's database format change. This present project extends the gedcom format for use in systematics or species categorization. All named taxonomic levels are assumed to have originally been individual species and the software/database outputs all species as female until hybridization events can be added manually. This tool is used to develop the data at http://genealogyoflife.com. It converted the data from 1.2 million species to over 2 million gedcom females. -
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Darwin_Test 3.2
Sortware application to validate and check records.
Darwin Test is a software application to validate and check records from tables in a Darwincore1.2 or Darwincore1.4 format. It also exports the previous formats to the Darwin Core Archive standard and allows the inverse process. Also can transform tables from Darwincore1.2 to Darwincore1.4 and the inverse process from Darwincore1.4 to Darwincore1.2. -
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Darwin_Test 3.3
Darwin Test is a software application to validate and correct records
Darwin Test is a software application to validate and correct records from standards Darwin Core 1.2, Darwin Core 1.4 and Darwin Core Archive. It also can generalize or delete coordinates in those records of the Darwin Core that are considered sensitive data. -
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GoClone is Excel-based software that aids biologists in the design of truncation mutants for genes. It allows for expression in a variety of vectors, and provides helpful information for downstream experiments.
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HZL 4.1
Software to manage and digitize botanical and zoological collections
HZL 4.1 is the updated version of a software application based on MS-Access, designed to manage and digitize botanical and zoological collections -
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HZL 4.2 is the updated version of a software application based on MS-Access, designed to manage and digitize botanical and zoological collections.
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HZL 4.3
software application to manage botanical and zoological collections
HZL 4.2 is the updated version of a software application based on MS-Access, designed to manage and digitize botanical and zoological collections. -
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HZL is a computer application based on MS-Access, designed to manage and digitize botanical and zoological collections. Credits and further information about Herbar-Zoorbar Ligero in its website: http://www.gbif.es/hzl/hzl.php
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HZL Beta 2 is the updated version of a software application based on MS-Access, designed to manage and digitize botanical and zoological collections.
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Tools for T-RFLP data analysis
VB macros and a template for the analysis of T-RFLP data using Excel.
A collection of Visual Basic macros and a template for the analysis of terminal restriction fragment length polymorphism data using Microsoft Excel. -
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XLibraryDisplay
A sequence analysis tool for protein engineering
XLibraryDisplay is an intuitive sequence analysis program optimized for protein engineering. It is ideal for all directed evolution platforms including phage, ribosome, and yeast display. Analysis can be quickly done on hundreds to thousands of sequences. Best suited for Sanger sequencing. Requirements: Microsoft Windows XP, 7, 8, or 10 and Excel 2007, 2010, 2013, or 2016 Described in Stafford et al JCIM 2014: http://pubs.acs.org/doi/abs/10.1021/ci500362s -
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Zoorbar 3.0
Zoorbar 3.0, software to manage and digitize zoological collection
Zoorbar 3.0 is the updated version of a software application based on MS-Access, designed to manage and digitize zoological collections. Find credits and further information about Zoorbar 3.0 on its website: http://www.gbif.es/zoorbar/zoorbar.php. -
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diagnostic-keyword-index
Healthcare Diagnostic Keyword Index
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siMacro is simple GUI tool for cell based genome wide siRNA screen data processing. It calculates statistical parameters such as Z score and robust Z score.
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