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<rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Activity for saint-apms</title><link>https://sourceforge.net/p/saint-apms/activity/</link><description>Recent activity for saint-apms</description><language>en</language><lastBuildDate>Tue, 03 Sep 2024 18:18:30 -0000</lastBuildDate><item><title>Asma Bankapur created ticket #18</title><link>https://sourceforge.net/p/saint-apms/bugs/18/</link><description>SAINTq error: St12out_of_range</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Asma Bankapur</dc:creator><pubDate>Tue, 03 Sep 2024 18:18:30 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/18/</guid></item><item><title>Laura Woods posted a comment on ticket #15</title><link>https://sourceforge.net/p/saint-apms/bugs/15/?limit=25#3984</link><description>Hey! I've got the same error, but I'm just working with the example data: "SAINTexpress-int.exe" "SAINTexpress_v3.6.3__2018-03-09\example input files\TIP49\inter.dat" "SAINTexpress_v3.6.3__2018-03-09\example input files\TIP49\prey.dat" "SAINTexpress_v3.6.3__2018-03-09\example input files\TIP49\bait.dat" Input files are: SAINTexpress_v3.6.3__2018-03-09\example input files\TIP49\inter.dat, SAINTexpress_v3.6.3__2018-03-09\example input files\TIP49\prey.dat, SAINTexpress_v3.6.3__2018-03-09\example input...</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Laura Woods</dc:creator><pubDate>Tue, 18 Jul 2023 11:53:24 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/15/?limit=25#3984</guid></item><item><title>Mira Sohn posted a comment on ticket #17</title><link>https://sourceforge.net/p/saint-apms/bugs/17/?limit=25#0e39</link><description>By any chance, is it possible to edit my ticket? I'd like to hide my bait name in the middle. Please delete my ticket if it's impossible so I can resubmit after editing.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Mira Sohn</dc:creator><pubDate>Mon, 10 Apr 2023 22:35:22 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/17/?limit=25#0e39</guid></item><item><title>Mira Sohn created ticket #17</title><link>https://sourceforge.net/p/saint-apms/bugs/17/</link><description>SAINTexpress with extremely high spectral count </description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Mira Sohn</dc:creator><pubDate>Mon, 10 Apr 2023 22:16:08 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/17/</guid></item><item><title>Jonathan Boulais posted a comment on ticket #16</title><link>https://sourceforge.net/p/saint-apms/bugs/16/?limit=25#58cf</link><description>The termination is caused by the dataset having a single control. SAINTexpress-int requires at least 2 negative controls, whereas SAINTexpress-spc can deal with a single negative control.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Jonathan Boulais</dc:creator><pubDate>Thu, 20 Oct 2022 06:09:34 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/16/?limit=25#58cf</guid></item><item><title>Jonathan Boulais created ticket #16</title><link>https://sourceforge.net/p/saint-apms/bugs/16/</link><description>SAINTexpress-int 3.6.1 char const* error</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Jonathan Boulais</dc:creator><pubDate>Tue, 18 Oct 2022 19:26:32 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/16/</guid></item><item><title>Jonathan Boulais modified a comment on ticket #9</title><link>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#6fdc</link><description>Hi Hyungwon, I'm using SAINTexpress-int on intensity data. While I removed proteins having zero intensities, I'm getting a termination similar to Craig's : terminate called after throwing an instance of 'char const*' Aborted As a test, I ran SAINTexpress-spc using the same files and it works fine. Any help would be appreciated ! Many thanks ! Jonathan</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Jonathan Boulais</dc:creator><pubDate>Tue, 18 Oct 2022 04:10:17 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#6fdc</guid></item><item><title>Jonathan Boulais posted a comment on ticket #9</title><link>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#6fdc</link><description>Hi Hyungwon, I'm using SAINTexpress-int on intensity data. While I removed proteins having zero intensities, I'm getting a termination similar to Craig's : terminate called after throwing an instance of 'char const*' Aborted Any help would be appreciated ! Many thanks ! Jonathan</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Jonathan Boulais</dc:creator><pubDate>Tue, 18 Oct 2022 04:04:39 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#6fdc</guid></item><item><title>Witold Eryk created ticket #15</title><link>https://sourceforge.net/p/saint-apms/bugs/15/</link><description>L is larger than the number of control IPs.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Witold Eryk</dc:creator><pubDate>Mon, 11 Apr 2022 08:02:58 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/15/</guid></item><item><title>Joan Josep Bech-Serra posted a comment on a wiki page</title><link>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#3684</link><description>Hi Guo and Hyungwon, I am trying to improve my results in SAINT by adding interaction data in my analysis. However, I have some things that I need to clarify. In the example provided in the manual of SAINT you show a file with two columns: the first one with a list of GOIDs (not used by the software to compute the TopoAvgP) and the second one, the important one, with a list of genes separated with a blank space, for each GOID. I supose that the genes shown for each GOID (for example, for GO:0000002...</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Joan Josep Bech-Serra</dc:creator><pubDate>Mon, 04 Apr 2022 13:36:55 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#3684</guid></item><item><title>Witold Eryk posted a comment on ticket #14</title><link>https://sourceforge.net/p/saint-apms/bugs/14/?limit=25#1bc8</link><description>Just recently moved to mac. Although I was able to build the binary on linux, I just recently moved to mac. I would be great if you could provide build instructions for this platform. Being able to build a software from source allows to have more confidence and trust in the software. Some build instructions for Windows would also be great. I am looking forward to the build instructions, and thank you so much for looking into it.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Witold Eryk</dc:creator><pubDate>Tue, 01 Feb 2022 07:36:19 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/14/?limit=25#1bc8</guid></item><item><title>Guo Ci Teo posted a comment on ticket #14</title><link>https://sourceforge.net/p/saint-apms/bugs/14/?limit=25#cc81</link><description>I have not tested it to compile in Mac. Do you have access to Windows or Linux machines? If you do, there are compiled binaries in the Precompiled_binariesfolder in the tar.gz file.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Guo Ci Teo</dc:creator><pubDate>Mon, 31 Jan 2022 22:28:53 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/14/?limit=25#cc81</guid></item><item><title>Witold Eryk posted a comment on ticket #14</title><link>https://sourceforge.net/p/saint-apms/bugs/14/?limit=25#850c</link><description>SAINTexpress_v3.6.3__2018-03-09.tar.gz</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Witold Eryk</dc:creator><pubDate>Mon, 31 Jan 2022 20:34:42 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/14/?limit=25#850c</guid></item><item><title>Guo Ci Teo posted a comment on ticket #14</title><link>https://sourceforge.net/p/saint-apms/bugs/14/?limit=25#3936</link><description>What did you download?</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Guo Ci Teo</dc:creator><pubDate>Mon, 31 Jan 2022 18:30:53 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/14/?limit=25#3936</guid></item><item><title>Witold Eryk posted a comment on ticket #14</title><link>https://sourceforge.net/p/saint-apms/bugs/14/?limit=25#a025</link><description>I am also attaching the bootsrap.log</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Witold Eryk</dc:creator><pubDate>Tue, 25 Jan 2022 15:29:14 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/14/?limit=25#a025</guid></item><item><title>Witold Eryk created ticket #14</title><link>https://sourceforge.net/p/saint-apms/bugs/14/</link><description>Build on MacOS</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Witold Eryk</dc:creator><pubDate>Tue, 25 Jan 2022 13:39:13 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/14/</guid></item><item><title>Armel Nicolas posted a comment on ticket #13</title><link>https://sourceforge.net/p/saint-apms/bugs/13/?limit=25#5167</link><description>Ok, so I actually should not have focused on the messages. Previously I was getting the above messages but no list. Now I still get the same messages, but the list is successfully created. So whichever reason I was not getting the list for was fixed as I tried to troubleshoot the messages although they were actually unrelated. Sorry for the trouble, please close (or even delete) this bug.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Armel Nicolas</dc:creator><pubDate>Fri, 27 Aug 2021 12:33:49 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/13/?limit=25#5167</guid></item><item><title>Armel Nicolas created ticket #13</title><link>https://sourceforge.net/p/saint-apms/bugs/13/</link><description>SAINTexpress-int.exe error (3.4)</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Armel Nicolas</dc:creator><pubDate>Fri, 27 Aug 2021 12:28:14 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/13/</guid></item><item><title>Estefany Guzman posted a comment on a wiki page</title><link>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#7021</link><description>Parsing prey file prey.dat ...libc++abi.dylib: terminating with uncaught exception of type std::runtime_error: invalid delimiter ^ I am getting this error even when utilizing the prey.dat file that came with the package. Any suggestions on how to correct the issue?</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Estefany Guzman</dc:creator><pubDate>Mon, 19 Oct 2020 16:52:00 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#7021</guid></item><item><title>Mike created ticket #12</title><link>https://sourceforge.net/p/saint-apms/bugs/12/</link><description>SAINTexpress Imputed values</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Mike</dc:creator><pubDate>Thu, 07 Nov 2019 13:38:32 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/12/</guid></item><item><title>Altuğ Kamacıoğlu posted a comment on ticket #11</title><link>https://sourceforge.net/p/saint-apms/bugs/11/?limit=25#e7f5</link><description>Thank you, In my input files, there is PCDH7 but in result file, PCDH7 seems completely empty. Maybe it can be because bait name and the protein name is the same but it was not a problem when I'm using PSM values.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Altuğ Kamacıoğlu</dc:creator><pubDate>Tue, 22 Oct 2019 07:09:26 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/11/?limit=25#e7f5</guid></item><item><title>Hyungwon Choi posted a comment on ticket #11</title><link>https://sourceforge.net/p/saint-apms/bugs/11/?limit=25#d4c2</link><description>It seems that the data was properly run based on your list.txt file. There is a normalization step inside that scales the intensity value down in the final report (list.txt), and we replace zeros with a dot in the reporting. Unforunately the scoring algorithm must have determined that there is no significant interaction (all scores are zeros). I believe this has to do with the reproducibility across replicates. I'll look further to see if something else is wrong with the software.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Mon, 21 Oct 2019 15:53:02 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/11/?limit=25#d4c2</guid></item><item><title>Altuğ Kamacıoğlu created ticket #11</title><link>https://sourceforge.net/p/saint-apms/bugs/11/</link><description>Saintexpress-int result</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Altuğ Kamacıoğlu</dc:creator><pubDate>Mon, 21 Oct 2019 13:18:05 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/11/</guid></item><item><title>Hyungwon Choi posted a comment on ticket #10</title><link>https://sourceforge.net/p/saint-apms/bugs/10/?limit=25#613f</link><description>Hi, which command line did you run? Was it SAINTexpress-int command? I just tried it and it ran OK. Also, you had a lot of places where you had "100" as the intensity. Are these imputed values? SAINTexpress can actually do imputation on its own, and I think you should try that instead of a plugged-in version. Usually we see a lot of missing data in the controls, but your data has no missing data at all -- which is unlikely from the raw data. Please feel free to contact me at email address: hwcho...</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Fri, 20 Sep 2019 13:24:57 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/10/?limit=25#613f</guid></item><item><title>Robin Journot posted a comment on ticket #10</title><link>https://sourceforge.net/p/saint-apms/bugs/10/?limit=25#8629/12d9</link><description>Thank you very much, I forget to precise that I work with the SAINTexpress tool under galaxy at http://apostl.moffitt.org Best regards, Robin Journot De: "Hyungwon Choi" hwchoi912@users.sourceforge.net À: "[saint-apms:bugs]" 10@bugs.saint-apms.p.re.sourceforge.net Envoyé: Mardi 17 Septembre 2019 13:41:27 Objet: [saint-apms:bugs] #10 Error in Spec sum Hi, we will take a look and get back to you as soon as we figure it out. Hyungwon [bugs:#10] Error in Spec sum Status: open Group: v1.0 (example) Created:...</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Robin Journot</dc:creator><pubDate>Wed, 18 Sep 2019 00:00:17 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/10/?limit=25#8629/12d9</guid></item><item><title>Hyungwon Choi posted a comment on ticket #10</title><link>https://sourceforge.net/p/saint-apms/bugs/10/?limit=25#8629</link><description>Hi, we will take a look and get back to you as soon as we figure it out. Hyungwon</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Tue, 17 Sep 2019 04:41:27 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/10/?limit=25#8629</guid></item><item><title>Robin Journot created ticket #10</title><link>https://sourceforge.net/p/saint-apms/bugs/10/</link><description>Error in Spec sum</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Robin Journot</dc:creator><pubDate>Tue, 17 Sep 2019 00:19:06 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/10/</guid></item><item><title>rachita srivastava modified a comment on ticket #9</title><link>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#6633</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">rachita srivastava</dc:creator><pubDate>Wed, 17 Apr 2019 13:25:03 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#6633</guid></item><item><title>rachita srivastava posted a comment on ticket #9</title><link>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#6633</link><description>Hi. I am trying to run saintexpress for IP data for a trancription factor. For me the run is getting aborted after throwing an instance of 'std::runtime_error' The command I gave was: SAINTexpress-int interaction_file.dat prey_file.dat bait_file.dat Input files are: interaction_file.dat, prey_file.dat, bait_file.dat Interaction file: "interaction_file.dat" Prey file: "prey_file.dat" Bait file: "bait_file.dat" GO file: "" Parsing prey file prey_file.dat ...done. Parsing prey file bait_file.dat ...done....</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">rachita srivastava</dc:creator><pubDate>Wed, 17 Apr 2019 13:22:43 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#6633</guid></item><item><title>Hyungwon Choi posted a comment on ticket #9</title><link>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#7349</link><description>Hi Craig, this is happening because there are interactions for which the intensities are all zero. It still tracks 0 intensities as missing observations within the software. We used to have a routine to plug zeros in, but at some point we decided not to do this for user's convenience.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Wed, 27 Jun 2018 09:35:37 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#7349</guid></item><item><title>Craig Lawless posted a comment on ticket #9</title><link>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#dc6e</link><description>Hi Hyungwon, It works with all interactions with zero intensity removed. So does SAINTexpress not treat zero intensity interactions the same as those that are missing (from control/IP replicates)? Thank you Craig</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Craig Lawless</dc:creator><pubDate>Wed, 27 Jun 2018 09:30:23 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#dc6e</guid></item><item><title>Hyungwon Choi posted a comment on ticket #9</title><link>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#7c59</link><description>Hi Craig, Can you try after removing all the interactions that has zero values? Hyungwon</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Wed, 27 Jun 2018 01:52:49 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/9/?limit=25#7c59</guid></item><item><title>Craig Lawless created ticket #9</title><link>https://sourceforge.net/p/saint-apms/bugs/9/</link><description>SAINTexpress-int Aborted</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Craig Lawless</dc:creator><pubDate>Tue, 26 Jun 2018 16:23:23 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/9/</guid></item><item><title>saint-apms released /SAINTexpress_v3.6.3__2018-03-09.tar.gz</title><link>https://sourceforge.nethttps%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.6.3__2018-03-09.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Thu, 15 Mar 2018 17:26:50 -0000</pubDate><guid>https://sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.6.3__2018-03-09.tar.gz/download</guid></item><item><title>SASI MANNE posted a comment on ticket #8</title><link>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#f4fe</link><description>The input format was not unix compatible which was causing the error,it is fixed now. Your manual at http://crapome.org/sites/default/files/bi0815.pdf helped. For future reference "Reopen tab-delimited files generated from Mac OS X or Microsoft Windows in a text editor in a Unix environment and re-save as Unix-compatible tab-delimited files. The Unix utilities mac2unix and dos2unix may be used for this purpose. Alternatively, open each file in a nano text editor, press Ctrl+O once for saving, and...</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">SASI MANNE</dc:creator><pubDate>Thu, 18 Jan 2018 23:51:41 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#f4fe</guid></item><item><title>Hyungwon Choi posted a comment on ticket #8</title><link>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#f564</link><description>I'm not too sure. Your data works on mine, both on mac and linux after removing the peptide column. The only thing I can suspect is the new line character difference, even then we addressed this issue in the code.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Fri, 12 Jan 2018 23:46:36 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#f564</guid></item><item><title>SASI MANNE posted a comment on ticket #8</title><link>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#a6a8</link><description>I wanted to know which version worked and on which OS,i used the same input files on MacOSx and using saintq_v0.0.4,still getting this error,do u have any suggestion to fix this</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">SASI MANNE</dc:creator><pubDate>Fri, 12 Jan 2018 19:17:39 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#a6a8</guid></item><item><title>SASI MANNE posted a comment on a wiki page</title><link>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#5a96</link><description>Hi, I am trying to run saintq on Linux and am getting this error St12out_of_range vector::_M_range_check: __n (which is 2) &gt;= this-&gt;size() (which is 1) I swtiched operating systems from mac to linux to see if it makes any changes in error i am getting on the same dataset. Can you check this error and see what i am doing wrong ? Thank you Sasi</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">SASI MANNE</dc:creator><pubDate>Fri, 12 Jan 2018 19:13:55 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#5a96</guid></item><item><title>SASI MANNE posted a comment on ticket #8</title><link>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#63ad</link><description>Thank you Hyungwon,i will try.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">SASI MANNE</dc:creator><pubDate>Thu, 04 Jan 2018 01:43:37 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#63ad</guid></item><item><title>Hyungwon Choi posted a comment on ticket #8</title><link>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#fbdb</link><description>One thing I would do is to set "normalize_control=true" instead of false. Attaching the input and output again.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Thu, 04 Jan 2018 00:39:47 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#fbdb</guid></item><item><title>Hyungwon Choi posted a comment on ticket #8</title><link>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#cd95</link><description>Not really, I just removed one column. I'm attaching the input and output files. Hw</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Thu, 04 Jan 2018 00:35:49 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#cd95</guid></item><item><title>SASI MANNE posted a comment on ticket #8</title><link>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#4aff</link><description>Hi, Thankyou for the quick reply,i removed the second column and tried rerunning and i am still getting the same error,did u have to change anything else in the paramter file or the input file? Thank you Sasi</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">SASI MANNE</dc:creator><pubDate>Wed, 03 Jan 2018 13:00:32 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#4aff</guid></item><item><title>Hyungwon Choi posted a comment on ticket #8</title><link>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#5814</link><description>Hi, your NS_LFQ.tsv file contains protein and "peptide" labels even though the parameter file says "protein level" analysis. So you need to remove either the first or the second column in the NS_LFQ.tsv file. I just tested with your sample file and it works. Let me know if this doesn't work for you. HC</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Tue, 02 Jan 2018 23:02:34 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/8/?limit=25#5814</guid></item><item><title>SASI MANNE posted a comment on a wiki page</title><link>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#d86b</link><description>Hi Guo and Hyungwon, I am trying to run saintq and getting the following error "St12out_of_range vector" and created a bug " #8 Out of range error",can you please look in to this and help me with the format of my param file and input files. Thank you Sasi</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">SASI MANNE</dc:creator><pubDate>Tue, 02 Jan 2018 18:08:22 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#d86b</guid></item><item><title>SASI MANNE created ticket #8</title><link>https://sourceforge.net/p/saint-apms/bugs/8/</link><description>Out of range error</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">SASI MANNE</dc:creator><pubDate>Tue, 02 Jan 2018 18:04:11 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/8/</guid></item><item><title>Sudhir Jadhao posted a comment on a wiki page</title><link>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#8468</link><description>Thank you for your valuable time, I will try through CRAOome and Prohitz.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Sudhir Jadhao</dc:creator><pubDate>Mon, 10 Jul 2017 12:59:28 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#8468</guid></item><item><title>Sudhir Jadhao modified a comment on a wiki page</title><link>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#b088</link><description>Dear Guo and Hyungwon, Greetings for the day!! I want to analyes RIME data with saintq v4. I have downloaded the exe file and tried to run it. But I am not able install the exe file , aftter double clicking on exe file just balck window opens and get close immediately in 2 to 3 secs. Can you please help to solve above issue.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Sudhir Jadhao</dc:creator><pubDate>Mon, 10 Jul 2017 12:49:37 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#b088</guid></item><item><title>Hyungwon Choi posted a comment on a wiki page</title><link>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#9617</link><description>Hi Sudhir, The file must be run from a command prompt (not a click-based program). To do this, you have to create an input parameter file placed in the same directory as the input data (spread sheet) according to the manuals and examples provided in the other zip file (saintq v0.0.4.tar.gz). If you aren't familiar with using the command line interface, then you can run the other versions of SAINT (SAINTexpress) in the CRAPome website or through ProHitz. Hope you can get it to work. Hw</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Mon, 10 Jul 2017 12:35:33 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#9617</guid></item><item><title>Sudhir Jadhao posted a comment on a wiki page</title><link>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#b088</link><description>Dear Guo and Hyungwon, Greetings for the day!! I want to analyes RIME data with saintq v4. I downloaded the exe file and tried to run it. But I am not able install the exe file , aftter double clicking on exe file just balck window opens and get close immediately in 2 to 3 secs. Can you please help to solve above issue.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Sudhir Jadhao</dc:creator><pubDate>Mon, 10 Jul 2017 12:10:37 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/wiki/Home/?limit=25#b088</guid></item><item><title>saint-apms released /saintq_v0.0.4.exe</title><link>https://sourceforge.nethttps%3A//sourceforge.net/projects/saint-apms/files/saintq_v0.0.4.exe/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Sun, 19 Mar 2017 20:25:02 -0000</pubDate><guid>https://sourceforge.net/projects/saint-apms/files/saintq_v0.0.4.exe/download</guid></item><item><title>saint-apms released /SAINTq_old_versions/saintq_v0.0.2.tar.gz</title><link>https://sourceforge.nethttps%3A//sourceforge.net/projects/saint-apms/files/SAINTq_old_versions/saintq_v0.0.2.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Sun, 20 Mar 2016 04:36:02 -0000</pubDate><guid>https://sourceforge.net/projects/saint-apms/files/SAINTq_old_versions/saintq_v0.0.2.tar.gz/download</guid></item><item><title>saint-apms released /SAINTq_old_versions/saintq_v0.0.3.tar.gz</title><link>https://sourceforge.nethttps%3A//sourceforge.net/projects/saint-apms/files/SAINTq_old_versions/saintq_v0.0.3.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Sun, 20 Mar 2016 04:36:02 -0000</pubDate><guid>https://sourceforge.net/projects/saint-apms/files/SAINTq_old_versions/saintq_v0.0.3.tar.gz/download</guid></item><item><title>Salvatore Loguercio posted a comment on ticket #7</title><link>https://sourceforge.net/p/saint-apms/bugs/7/?limit=25#9cc0</link><description>Hi Guo, saintq 0.04 now compiles correctly on Mac OS X 10.11.2 El Capitan. Thank...</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Salvatore Loguercio</dc:creator><pubDate>Tue, 01 Mar 2016 21:33:33 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/7/?limit=25#9cc0</guid></item><item><title>Guo Ci Teo posted a comment on ticket #7</title><link>https://sourceforge.net/p/saint-apms/bugs/7/?limit=25#49f2</link><description>Hi Brian, I have uploaded a new version. Please try that.</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Guo Ci Teo</dc:creator><pubDate>Sat, 27 Feb 2016 20:18:52 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/7/?limit=25#49f2</guid></item><item><title>saint-apms released /saintq_v0.0.4.tar.gz</title><link>https://sourceforge.nethttps%3A//sourceforge.net/projects/saint-apms/files/saintq_v0.0.4.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Sat, 27 Feb 2016 20:17:05 -0000</pubDate><guid>https://sourceforge.net/projects/saint-apms/files/saintq_v0.0.4.tar.gz/download</guid></item><item><title>Salvatore Loguercio posted a comment on ticket #7</title><link>https://sourceforge.net/p/saint-apms/bugs/7/?limit=25#aad0</link><description>Hi Erik, I tried what you suggested but to no avail ( on mac os x El Capitan, 10.11.2)....</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Salvatore Loguercio</dc:creator><pubDate>Fri, 26 Feb 2016 20:04:38 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/7/?limit=25#aad0</guid></item><item><title>saint-apms released /saintq_v0.0.3.tar.gz</title><link>https://sourceforge.nethttps%3A//sourceforge.net/projects/saint-apms/files/saintq_v0.0.3.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Sun, 14 Feb 2016 02:13:03 -0000</pubDate><guid>https://sourceforge.net/projects/saint-apms/files/saintq_v0.0.3.tar.gz/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress_v3.5.1__2014-09-20.tar.gz</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.5.1__2014-09-20.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.5.1__2014-09-20.tar.gz/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress_v3.4__2014_Aug_19.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.4__2014_Aug_19.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.4__2014_Aug_19.zip/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress_v3.0.5.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.0.5.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.0.5.zip/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress_v3.1.0.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.1.0.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.1.0.zip/download</guid></item><item><title>saint-apms released /SAINTq_old_versions/saintq_v0.0.1.tar.gz</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTq_old_versions/saintq_v0.0.1.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTq_old_versions/saintq_v0.0.1.tar.gz/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress-v3.0.2.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress-v3.0.2.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress-v3.0.2.zip/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress-v3.0.1.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress-v3.0.1.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress-v3.0.1.zip/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress_v3.0.4.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.0.4.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.0.4.zip/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress_v3.5__2014-09-20-Win64.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.5__2014-09-20-Win64.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.5__2014-09-20-Win64.zip/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress_v3.5__2014-09-20.tar.gz</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.5__2014-09-20.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.5__2014-09-20.tar.gz/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress_v3.3__2014_Apr_23.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.3__2014_Apr_23.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.3__2014_Apr_23.zip/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress-v3.0.3.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress-v3.0.3.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress-v3.0.3.zip/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress_v3.6__2014-12-04.tar.gz</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.6__2014-12-04.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress_v3.6__2014-12-04.tar.gz/download</guid></item><item><title>saint-apms released /SAINTexpress_old_versions/SAINTexpress-Win64.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress-Win64.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:15:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_old_versions/SAINTexpress-Win64.zip/download</guid></item><item><title>saint-apms released /SAINT_old_versions/SAINT_v2.3.3.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.3.3.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.3.3.zip/download</guid></item><item><title>saint-apms released /SAINT_manual_old_versions/saint-vignette-2011Nov16.pdf</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_manual_old_versions/saint-vignette-2011Nov16.pdf/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_manual_old_versions/saint-vignette-2011Nov16.pdf/download</guid></item><item><title>saint-apms released /SAINT_old_versions/SAINT_v2.2.2.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.2.2.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.2.2.zip/download</guid></item><item><title>saint-apms released /SAINT_old_versions/SAINT_v2.2.1.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.2.1.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.2.1.zip/download</guid></item><item><title>saint-apms released /SAINT_old_versions/SAINT_v.2.3.0.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v.2.3.0.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v.2.3.0.zip/download</guid></item><item><title>saint-apms released /SAINT_old_versions/SAINT_v2.4.0.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.4.0.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.4.0.zip/download</guid></item><item><title>saint-apms released /SAINT_old_versions/SAINT_v2.3.4.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.3.4.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.3.4.zip/download</guid></item><item><title>saint-apms released /SAINT_old_versions/SAINT_v.2.3.1.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v.2.3.1.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v.2.3.1.zip/download</guid></item><item><title>saint-apms released /SAINT_manual_old_versions/saint-vignette-2012Jan23.pdf</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_manual_old_versions/saint-vignette-2012Jan23.pdf/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_manual_old_versions/saint-vignette-2012Jan23.pdf/download</guid></item><item><title>saint-apms released /SAINT_old_versions/SAINT_v2.3.2.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.3.2.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.3.2.zip/download</guid></item><item><title>saint-apms released /SAINT_manual_old_versions/saint-vignette-2011Oct23.pdf</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_manual_old_versions/saint-vignette-2011Oct23.pdf/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_manual_old_versions/saint-vignette-2011Oct23.pdf/download</guid></item><item><title>saint-apms released /SAINT_old_versions/SAINT_v2.2.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.2.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Tue, 02 Feb 2016 22:14:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_old_versions/SAINT_v2.2.zip/download</guid></item><item><title>saint-apms released /saintq_v0.0.2.tar.gz</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/saintq_v0.0.2.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Fri, 18 Dec 2015 08:13:02 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/saintq_v0.0.2.tar.gz/download</guid></item><item><title>saint-apms released /saintq_v0.0.1.tar.gz</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/saintq_v0.0.1.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Fri, 27 Nov 2015 06:53:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/saintq_v0.0.1.tar.gz/download</guid></item><item><title>erik verschueren posted a comment on ticket #7</title><link>https://sourceforge.net/p/saint-apms/bugs/7/?limit=25#f2a1</link><description>Hi Brian, I had a similar issue. I ended up first installing the boost and nlopt...</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">erik verschueren</dc:creator><pubDate>Tue, 27 Oct 2015 22:02:17 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/7/?limit=25#f2a1</guid></item><item><title>saint-apms released /SAINT_v2.5.0.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINT_v2.5.0.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Mon, 26 Oct 2015 00:58:01 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINT_v2.5.0.zip/download</guid></item><item><title>Brian Capaldo created ticket #7</title><link>https://sourceforge.net/p/saint-apms/bugs/7/</link><description>Make error on Mac OSX Yosemite</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Brian Capaldo</dc:creator><pubDate>Fri, 18 Sep 2015 13:52:52 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/7/</guid></item><item><title>hector created ticket #6</title><link>https://sourceforge.net/p/saint-apms/bugs/6/</link><description>Saint express crashing</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">hector</dc:creator><pubDate>Fri, 21 Aug 2015 11:31:18 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/6/</guid></item><item><title>Guo Ci Teo posted a comment on ticket #5</title><link>https://sourceforge.net/p/saint-apms/bugs/5/?limit=25#f06f</link><description>Hi Jonas, I have included a set of sample input files in the latest version. Best,...</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Guo Ci Teo</dc:creator><pubDate>Mon, 04 May 2015 04:33:41 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/5/?limit=25#f06f</guid></item><item><title>saint-apms released /SAINTexpress_v3.6.1__2015-05-03.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.6.1__2015-05-03.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Mon, 04 May 2015 04:28:04 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.6.1__2015-05-03.zip/download</guid></item><item><title>Jonas Grossmann created ticket #5</title><link>https://sourceforge.net/p/saint-apms/bugs/5/</link><description>Proper InputFiles not available</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Jonas Grossmann</dc:creator><pubDate>Thu, 30 Apr 2015 13:37:30 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/bugs/5/</guid></item><item><title>saint-apms released /SAINTexpress_v3.6_Win64_binaries.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.6_Win64_binaries.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Thu, 04 Dec 2014 09:06:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.6_Win64_binaries.zip/download</guid></item><item><title>saint-apms released /SAINTexpress_v3.6__2014-12-04.tar.gz</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.6__2014-12-04.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Thu, 04 Dec 2014 09:06:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.6__2014-12-04.tar.gz/download</guid></item><item><title>Hyungwon Choi created a blog post</title><link>https://sourceforge.net/p/saint-apms/news/2014/11/new-visualization-tool-for-ap-ms-data/</link><description>New visualization tool for AP-MS data</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Hyungwon Choi</dc:creator><pubDate>Sun, 30 Nov 2014 08:18:34 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/news/2014/11/new-visualization-tool-for-ap-ms-data/</guid></item><item><title>saint-apms released /SAINTexpress_v3.5.1__2014-09-20.tar.gz</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.5.1__2014-09-20.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Fri, 07 Nov 2014 08:38:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.5.1__2014-09-20.tar.gz/download</guid></item><item><title>saint-apms released /SAINTexpress_v3.5__2014-09-20-Win64.zip</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.5__2014-09-20-Win64.zip/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Sat, 20 Sep 2014 05:46:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.5__2014-09-20-Win64.zip/download</guid></item><item><title>saint-apms released /SAINTexpress_v3.5__2014-09-20.tar.gz</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.5__2014-09-20.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Sat, 20 Sep 2014 05:45:06 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.5__2014-09-20.tar.gz/download</guid></item><item><title>saint-apms released /SAINTexpress_v3.5__2014-09-20.tar.gz</title><link>https://sourceforge.nethttp%3A//sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.5__2014-09-20.tar.gz/download</link><description/><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">saint-apms</dc:creator><pubDate>Sat, 20 Sep 2014 05:25:03 -0000</pubDate><guid>http://sourceforge.net/projects/saint-apms/files/SAINTexpress_v3.5__2014-09-20.tar.gz/download</guid></item><item><title>Guo Ci Teo modified a wiki page</title><link>https://sourceforge.net/p/saint-apms/wiki/Home/</link><description>Home</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Guo Ci Teo</dc:creator><pubDate>Tue, 19 Aug 2014 08:21:23 -0000</pubDate><guid>https://sourceforge.net/p/saint-apms/wiki/Home/</guid></item></channel></rss>