LiDSiM
LImits of Detection SImulation for Microbes
LiDSiM is a tool to estimate the possible influence of error-tolerant database searches and proteogenomic approaches on the amount of unidentified spectra and the ratios of taxonomic relationship of identified spectra in MS/MS studies of microbial proteomes.
For more details about LiDSiM and its functioning, please see
"Estimating the Computational Limits of Detection of Microbial Non-Model Organisms"
Mathias Kuhring and Bernhard Y....