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Showing 330 open source projects for "user%20%26%20admin%20panel%20script"

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  • 1
    miRDiana

    miRDiana

    MATLAB package to find the miRNAs targeting a list of genes

    To select miRNA target genes we developed software in MATLAB® (MathWorks®) called miRDiana that collects the union of mouse validated targets from the TargetScan, MicroCosm, mirTarBase and miRWalk 2.0 databases. Firstly, the software downloads each database and preprocesses by standardizing the miRNA and gene names. It strips the miRNA names from the species ids and converts the gene names to the official symbols of the National Center for Biotechnology Information (NCBI) database. Next, for...
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  • 2
    ebfformat

    ebfformat

    An Efficient Binary data Format

    EBF, which stands for Efficient Binary Format, is a binary file format for reading and writing binary data easily. Reading writing routines are currently available in C,C++,Fortran,Java, Python, IDL, MATLAB. A program called ebftkpy which has a set of utility functions to work with the .ebf files , e.g., viewing the contents and getting a summary, is also provided. The EBF specification is designed to be concise and easy to understand to make it easier for others to write their own code...
    Downloads: 1 This Week
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  • 3

    OS X Portable Applications

    Portable OS X FOSS applications

    OS X FOSS portable applications are packaged so you can carry around on any portable device, USB thumb drive, iPod, portable hard drive, memory card, other portable device (or also on your internal hard disk), taking your preferences with you.
    Downloads: 44 This Week
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  • 4
    LIPRAS, Peak Fitting Software

    LIPRAS, Peak Fitting Software

    Peak fitting diffraction data

    LIPRAS v466 LIPRAS [LEEP-ruhs], short for Line-Profile Analysis Software, is a graphical user interface for least-squares fitting of Bragg peaks in powder diffraction data. For any region of the inputted data, user can choose which profile functions to apply to the fit, constrain profile functions, and view the resulting fit in terms of the profile functions chosen. If you use LIPRAS for your research, please cite it: Giovanni Esteves, Klarissa Ramos, Chris M.
    Downloads: 5 This Week
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  • 5
    Machine Learning Homework

    Machine Learning Homework

    Matlab Coding homework for Machine Learning

    The Machine-Learning-homework repository by user “Ayatans” is a collection of MATLAB code intended to solve or illustrate assignments in machine learning courses. It includes implementations of standard machine learning algorithms (such as regression, classification, etc.), scripts for data loading and preprocessing, and evaluation routines (e.g. accuracy, error metrics). Because it is structured as homework or practice material, the code is likely intended more for didactic use than for production deployment. ...
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  • 6
    KLT-IV
    KLT-IV v1.0 has been designed to offer a user-friendly graphical user interface for the determination of river flow velocity and river discharge using videos acquired using a variety of fixed and moving platforms. KLT-IV employs optical flow and computer vision techniques for the tracking of features present on the river surface with pixel displacements being converted to real-world velocities using an optimised camera model approach.
    Downloads: 0 This Week
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  • 7
    TauFactor

    TauFactor

    MatLab App for calculating the tortuosity factor of microstructure

    Please contact the author at sjc08@ic.ac.uk for any questions or if you wish to cite this application in a academic study. Journal paper available here: http://www.sciencedirect.com/science/article/pii/S2352711016300280 TauFactor is a MatLab application for efficiently calculating the tortuosity factor, as well as volume fractions, surface areas and triple phase boundary densities, from image based microstructural data. The tortuosity factor quantifies the apparent decrease in...
    Downloads: 4 This Week
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  • 8
    MLDSP-GUI
    An alignment-free standalone tool with interactive graphical user interface for DNA sequence comparison and analysis
    Downloads: 1 This Week
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  • 9
    Phenalysis

    Phenalysis

    Analyze agronomic plant research plots in aerial orthomosaic images.

    A graphical user interface to import, analyze and export plots from orthomosaic images of agronomic trials. Please cite the following reference in your work if you use Phenalysis: Khan Z and Miklavcic SJ (2019) An Automatic Field Plot Extraction Method From Aerial Orthomosaic Images. Front. Plant Sci. 10:683. doi: https://doi.org/10.3389/fpls.2019.00683 This tool is being developed through the sponsorship of the Australian Research Council's Industrial Transformation Research Hub on Wheat in a Hot and Dry Climate. ...
    Downloads: 0 This Week
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  • 10
    The reference implementation of the Kernel-Based Hough Transform (http://www.ic.uff.br/~laffernandes/projects/kht) for detecting straight lines in binary images moved to GitHub (https://github.com/laffernandes/kht).
    Downloads: 0 This Week
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  • 11
    CasADi
    A symbolic framework for C++, Python and Octave implementing automatic differentiation by source code transformation in forward and reverse modes on sparse matrix-valued computational graphs.
    Downloads: 3 This Week
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  • 12
    Liberal Learning Seminar

    Liberal Learning Seminar

    Code for a freshman seminar in animal behavior

    ...The program will combine several simulation models and allow students to alter parameters and use computers to study animal behavior. All student interactions will be through a friendly user interface -- no coding is required by students.
    Downloads: 0 This Week
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  • 13
    GVAR

    GVAR

    The GVAR Toolbox 1.1 is designed for the purpose of GVAR modelling.

    The GVAR Toolbox was originally launched in December 2010 with the release of version 1.0, sponsored by the European Central Bank. Version 1.1 was released in July 2011 and is available to download, free of charge, from this website. Derived from Dr. L.Vanessa Smith's project Exploring International Economic Linkages Using a Global Model, the GVAR Toolbox 1.1 is the second release of a collection of MatLab procedures with an Excel-based interface, designed for the purpose of GVAR...
    Downloads: 17 This Week
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  • 14
    Omniglot

    Omniglot

    Omniglot data set for one-shot learning

    This repository hosts the Omniglot dataset for one-shot learning, containing handwritten characters across multiple alphabets along with stroke data. It includes both MATLAB and Python starter scripts (e.g. demo.m, demo.py) to illustrate how to load the images and stroke sequences and run baseline experiments (such as classification by modified Hausdorff distance). The dataset provides both an image representation of each character and the time-ordered stroke coordinates ([x, y, t]) for each...
    Downloads: 0 This Week
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  • 15
    ADiGator

    ADiGator

    A MATLAB Automatic Differentiation Tool

    ADiGator is a source transformation via operator overloading tool for the automatic differentiation of mathematical functions written in MATLAB. Given a user written file, together with information on the inputs of said file, ADiGator uses forward mode automatic differentiation to generate a new file which contains the calculations required to compute the numeric derivatives of the original user function. Furthermore, these calculations are written entirely in the native MATLAB language, and thus the process may be repeated to obtain nth order derivative files. ...
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    Downloads: 1 This Week
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  • 16
    SegyMAT is a set of Matlab/Octave m-files to read and write SEG Y data following SEG Y Revision 0 and 1
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    Downloads: 7 This Week
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  • 17
    ATLAS_mPBPK

    ATLAS_mPBPK

    Modeling and Simulation of mPBPK models

    ATLAS mPBPK is a MATLAb-based tool for modeling and Simulation of minimal Physiology Based Pharmacokinetic (mPBPK) models of small and large molecules. The tool enables the users to perform: i) PK data visualization, ii) simulation, iii) parameter optimization, and iv) local sensitivity analysis (SA) of mPBPK models in a simple and efficient manner.
    Downloads: 0 This Week
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  • 18
    SparesPOP is a MATLAB implementation of a sparse semidefinite programming (SDP) relaxation method proposed for polynomial optimization problems (POPs). Please send a message to kojima-spop@is.titech.ac.jp if you have any question and/or request. We also release SparsePOPC++ and SparsePOPC++-windows. Both implementations are SparsePOP which does not use MATLAB, but only C++. In particular, SparsePOPC++-windows contains a binary file which works on Windows, and does not require to compile.
    Downloads: 0 This Week
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  • 19
    A framework to run MATLAB programs as batch jobs. Features a structured input description, integrity constraints and GUI.Independent parts of a job can execute in parallel on a cluster computer. Developed at Freiburg Brain Imaging (FBI) - http://fbi.uniklinik-freiburg.de/
    Downloads: 2 This Week
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  • 20
    Dynamic Linkage

    Dynamic Linkage

    Dynamic Linkage Social Aggregation Model

    This project will create a user-friendly modeling system for studying animal social aggregations. The model codifies the a new hypothesis that the animal's state, kinematics, and the group's emergent properties are dynamically linked together, with each one affecting the others. The model will be constructed using Object-Oriented MatLab.
    Downloads: 0 This Week
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  • 21
    Brain imaging software produced by the Brain Research Imaging Centre of The University of Edinburgh.
    Downloads: 51 This Week
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  • 22
    Matlab/Octave Rotations Library

    Matlab/Octave Rotations Library

    Library for working with 3D rotations in Matlab/Octave

    The Matlab/Octave rotations library is a collection of functions, bundled as m-scripts, that address computations and numerical handling of rotations in 3D Euclidean space. The rotation representations that are supported are rotation matrices (Rotmat), Quaternions (Quat), intrinsic ZYX Euler angles (Euler), fused angles (Fused) and tilt angles (Tilt). Operations such as composition, inversion, ZYX yaw extraction, fused yaw extraction, random generation, equality detection, vector rotation...
    Downloads: 1 This Week
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  • 23
    UmUTracker

    UmUTracker

    A MATLAB program for 2D particle tracking or 3D DHM based tracking.

    We present a versatile and fast MATLAB program (UmUTracker) that automatically detects and tracks particles by analyzing long video sequences acquired by either light microscopy or digital holography microscopy (DHM). Our program finds the 2D particle center position using an isosceles triangle transform and the axial position by a fast implementation of Rayleigh-Sommerfeld numerical reconstruction algorithm using a one dimensional radial intensity profile. *Updates v1.1: 2017/11/21- Bug...
    Downloads: 0 This Week
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  • 24
    The purpose of this program is to provide the user with a convenient algorithm for automatic Independent Component (IC) selection with respect to the contributions of the ICs to a certain event-related brain potential (ERP). www.jan-wessel.de
    Downloads: 1 This Week
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  • 25
    This is a MATLAB model of an end-to-end chain compliant to the DVB-T2 standard (ETSI EN 302 755 available from www.etsi.org). It was originally developed within the DVB consortium (www.dvb.org) by AICIA, BBC, Pace, Panasonic and SIDSA.
    Downloads: 9 This Week
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