Search Results for "genetic algorithm java" - Page 8

Showing 740 open source projects for "genetic algorithm java"

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  • 1
    CliqueSquare

    CliqueSquare

    Distributed RDF Processing over Hadoop

    CliqueSquare is a system for storing and querying large RDF graphs relying on Hadoop’s distributed file system (HDFS) and Hadoop’s MapReduce open-source implementation. It provides a novel partitioning and storage scheme that permits 1-level joins to be evaluated locally using efficient map-only joins. In addition, CliqueSquare is equipped with a unique optimization algorithm based on graphs and cliques capable of generating highly parallelizable flat query plans relying on n-ary equality joins.
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  • 2

    JAABA

    The Janelia Automated Animal Behavior Annotator

    The Janelia Automatic Animal Behavior Annotator (JAABA) is a machine learning-based system that enables researchers to automatically compute interpretable, quantitative statistics describing video of behaving animals. Through our system, users encode their intuition about the structure of behavior by labeling the behavior of the animal, e.g. walking, grooming, or following, in a small set of video frames. JAABA uses machine learning techniques to convert these manual labels into behavior...
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    Downloads: 3 This Week
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  • 3
    aisconvert
    Toolkit for processing genetic data. Currently supports (command-line): Half-IBD (Identity by descent) aka HIRs - between 2 or any number of files (in distances and cM); RAW2PED, PED2RAW conversions; regions of homozygousity and other converters.
    Downloads: 0 This Week
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  • 4
    JGAP is a Genetic Algorithms and Genetic Programming package written in Java. It is designed to require minimum effort to use, but is also designed to be highly modular. JGAP features grid functionality and a lot of examples. Many unit tests included. Legal notice/Impressum: Klaus Meffert An der Struth 25 D-65510 Idstein sourceforge <at> klausmeffert.de
    Downloads: 15 This Week
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  • 5
    Chemin Optimal

    Chemin Optimal

    allow to Find the optimal path using FORD algorithm

    Chemin optimal allows to draw nodes on a scene and link them with Arcs. You can affect values to each arc (the path's length). By clicking the launch button, chemin optimal show you the optimal path of the graphs using FORD algorithm. All operations are shown step by step. You can export the scene to a XML file. You can also load scene freom existing XML file. Chemin optimal check errors automatically before finding the minimal path. Chemin optimal is written in JAVA( JAVAFX ).
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  • 6
    Tetris Puzzle Solver

    Tetris Puzzle Solver

    Fills a rectangle using given tetris shapes

    Fills a rectangle using given tetris shapes (tetraminos) using an optimized brute force algorithm. A puzzle can have many different solutions; this solver will stop at the first one. Not all puzzles are solveable. Created to solve the annoying tetris puzzles in The Talos Principle and Sigils of Elohim.
    Downloads: 0 This Week
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  • 7
    MOEA Framework

    MOEA Framework

    A Free and Open Source Java Framework for Multiobjective Optimization

    The MOEA Framework is a free and open source Java library for developing and experimenting with multiobjective evolutionary algorithms (MOEAs) and other general-purpose multiobjective optimization algorithms. The MOEA Framework supports genetic algorithms, differential evolution, particle swarm optimization, genetic programming, grammatical evolution, and more. A number of algorithms are provided out-of-the-box, including NSGA-II, NSGA-III, ε-MOEA, GDE3 and MOEA/D. ...
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  • 8
    The project objective is the development of an optimization algorithm for the problem of stowing general cargo into platform supply vessels.
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  • 9
    Oxe is a web application that enables network monitoring. It is built on a service-oriented and a demon that uses the round robin algorithm for monitoring architecture. Written in Java GPL v3 license.
    Downloads: 0 This Week
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  • 10

    AESA

    All-purpose Encryption and Security Adaptation

    Starting as a personal study project, I have decided to share this security project. For now, it is a JAVA program that can be used to encrypt and decrypt simple file content (ie files), possibly later evolving into a utility with user interface and/or a library
    Downloads: 0 This Week
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  • 11

    GeneticThesaurus

    Annotation of genetic variants in repetitive regions

    GeneticThesaurus enables analysis of genetic variation in repetitive regions. See project wiki for details.
    Downloads: 0 This Week
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  • 12

    Simple File Manager

    A simple file manager especially for flash disks

    It is a simple software implemented with Java. The running environment is Java SE8, with some features of Javafx to improve the UI appearance.
    Downloads: 0 This Week
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  • 13
    HaploView is a Java based tool for use by biologists in the study of genetic haplotype data. It provides a quick, easy interface to many common tasks involved in such analyses. Please go to the homepage below for the latest version!
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    Downloads: 56 This Week
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  • 14

    gametes

    Generate complex SNP models and heterogeneous datasets

    Genetic Architecture Model Emulator for Testing and Evaluating Software (GAMETES) is an algorithm for the generation of complex single nucleotide polymorphism (SNP) models for simulated association studies. GAMETES is designed to generate epistatic models which we refer to as pure and strict, that constitute the worst-case in terms of detecting disease associations, since such associations may only be observed if all n-loci are included in the disease model.
    Downloads: 0 This Week
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  • 15
    sWangTiler

    sWangTiler

    A java implementation that generates wang tiles from any input image.

    ...This implementation is based on the strict wang tile algorithm as proposed by Xinyu Zhang and Young J. Kim in "Efficient Texture Synthesis Using Strict Wang Tiles". In order to calculate the lowest cost path between any edge- and sample image an implementation of Dijkstra's algorithm is used which was found in the java graph library 'JGraphT'. Credits to all mentioned parties and to http://www.texturemate.com/.
    Downloads: 0 This Week
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  • 16

    CUDAlign

    CUDAlign is a tool that aligns huge DNA sequences in CUDA capable GPUs

    CUDAlign is a tool able to align pairwise DNA sequences of unrestricted size in CUDA GPUs, using the Smith-Waterman algorithm combined with Myers-Miller. It produces the optimal alignment of 1 million base sequences in 45 seconds using a GTX 560 Ti. Many optimizations are being developed for this software. Look at the following papers for detailed information: [1] Edans Sandes, Alba Melo. Retrieving Smith-Waterman Alignments with Optimizations for Megabase Biological Sequences using GPU....
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  • 17
    ESTReMo

    ESTReMo

    An evolutionary simulator of transcription regulatory networks

    ESTReMo is a genetic algorithm-based simulator to explore the evolution of transcription factors and their binding motifs on realistic genomic backgrounds.
    Downloads: 0 This Week
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  • 18

    deapheap

    Deap is a doubly heap for both min and max number access.

    A deap is a doubly priority queue for efficient data operations. Both insertion and deletion operations take O(log(N)) time. Access of min or max takes constant time. It can be useful when both min and max are needed in the queue. It can also be used in situations where the number of items is too large and items with low priorities can be dropped with keep memory footprint small.
    Downloads: 0 This Week
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  • 19
    MODLEM

    MODLEM

    rule-based, WEKA compatible, Machine Learning algorithm

    This project is a WEKA (Waikato Environment for Knowledge Analysis) compatible implementation of MODLEM - a Machine Learning algorithm which induces minimum set of rules. These rules can be adopted as a classifier (in terms of ML). It is a sequential covering algorithm, which was invented to cope with numeric data without discretization. Actually the nominal and numeric attributes are treated in the same way: attribute's space is being searched to find the best rule condition during rule...
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    Downloads: 20 This Week
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  • 20
    Intelligent Keyword Miner

    Intelligent Keyword Miner

    Intelligent SEO keyword miner and predicing tool

    THIS IS A NETBEANS 8.02 PROJECT ENGLISH ONLY This program was made to help me with the patent research. It simply generates the search keywords, based on your upvotes or a downvotes of the input parameters. It can accept a text or URL (text takes a prescedence over the URL). If you input URL, it goes to a page, and learns its text from HTML format. This program is intelligent as it predicts what you may want to search next, based on your personal trends. After searching the...
    Downloads: 0 This Week
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  • 21
    Cenobi

    Cenobi

    cost estimation and management accounting, using neural networks

    Cenobi is designed for management accountants, not (only) for statisticians and data mining experts. Carefully arranged default settings make sure you can concentrate on Cenobi's many accounting features rather than worrying about setting up artificial neural networks or genetic algorithms, which are the main machine learning tools under Cenobi's hood. Cenobi's main benefits are: - ease of use - Utilizing artificial neural networks to estimate cost relationships, Cenobi is able to...
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  • 22
    fPotencia

    fPotencia

    Power flow library in C++

    fPotencia is the fruit of free time and passion for power systems simulation. After observing the lack of ready-to-implement libraries for power system analisys, and that the existing ones focus on command line workflow, I decided myself to start a project to fill the gap. Since Power system simulations have started needing to be executed in parallel, the old C-like designs are outdated; modular design is now needed to launch many simulations at the same time based on a base...
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  • 23

    Evolutionary Nursery

    A simple genetic algorithm for numerical optimization

    Evolutionary nursery is a result for my passion for developing genetic algorithms. I implemented this simple GA in 2008. This is especially intended for numerical optimization problems.
    Downloads: 0 This Week
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  • 24

    OnAGUI - Ontology Alignment GUI

    Software to help automatic or manual realisation of ontologi alignment

    This project has moved to https://github.com/lmazuel/onagui - OnAGUI (Ontology Alignment Graphical User Interface) is a project of alignment helper and viewer. You can edit ontology (SKOS, OWL) and edit alignment between concept of these ontologies. In addition, you can make automatic discovery of alignment, using different kind of algorithm. This work was initiated by Jean Charlet (http://www.limics.fr/index.php/annuaire), designed and developped by Laurent Mazuel on a post-doctoral...
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  • 25

    mpz_aprcl32

    MPZ APRCL32 can prove the primality of numbers, written in C and GMP.

    This code contains an implementation of the APR-CL primality proving algorithm. It is a conversion of the Java based APRT-CLE written by Dario Alpern, who had written his based on the UBASIC version from Yuji Kida. This version incorporates improvements based on Jason Moxham's APR-CL code, which greatly reduced run-time memory requirements. mpz_aprcl is meant to be compiled on systems that support C, GMP, and a 64-bit data type.
    Downloads: 0 This Week
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