Search Results for "mathworks matlab"
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Showing 18 open source projects for "mathworks matlab"
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MATLAB Simulink Challenge Project Hub
Lst of research and design project ideas
This repository is a project idea hub maintained by MathWorks, containing a curated list of research or design project ideas for MATLAB and Simulink. The aim is to help students or educators find inspiration and guidance for projects aligning with industry trends or technical challenges. It includes encouragement of industry-relevant topics. As well as categorization by technology or domain. -
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Plotly Graphing Library for MATLAB
Plotly Graphing Library for MATLAB
Create interactive charts in your web browser with MATLAB® and Plotly. -
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MATLAB.jl
Calling MATLAB in Julia through MATLAB Engine
The MATLAB.jl package provides an interface for using MATLAB® from Julia using the MATLAB C api. In other words, this package allows users to call MATLAB functions within Julia, thus making it easy to interoperate with MATLAB from the Julia language. You cannot use MATLAB.jl without having purchased and installed a copy of MATLAB® from MathWorks. This package is available free of charge and in no way replaces or alters any functionality of MathWorks's MATLAB product. -
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ReViMS
ReViMS, a 3D volume rendering tool for light-sheet/confocal microscopy
...It provides a number of tools for: (a) segmenting z-stacks of fluorescence images; (b) reconstructing the 3D surface of the aggregates and estimating several features (including the volume). ReViMS is written in MATLAB (The MathWorks, Inc., Massachusetts, USA). It is an open-source tool and the source code is freely available at: http://sourceforge.net/p/revims Requirements: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions. -
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ReViSP
ReViSP, a 3D volume rendering MATLAB tool for multicellular spheroids
Reconstruction and Visualization from a Single Projection (ReViSP) tool: a 3D volume rendering method we developed to reconstruct the 3D shape of multicellular spheroids, besides estimating the volume by counting the voxels (3D pixels) fully included in the 3D surface. ReViSP is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code is freely provided. Requirements for running ReViSP from the source code: MATLAB 2020a and Image Processing Toolbox 11.1 or later versions. Please, when using this software, cite these articles: (a) F. Piccinini, et al., Cancer multicellular spheroids: Volume assessment from a single 2D projection. ... -
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ANDTool
Analysis Nuclei DAB (AND) Tool
...The tool requires as input the original RGB images, and the FastRed, FastBlue, DAB channel, easily obtained using the Fiji function: "ImageJ" -> "Image" -> "Colour Deconvolution" -> "FastRed FastBlue DAB" Then, the tool first segment the nuclei using the FastBlue channel and the DAB channel, and then computes statistics by subdividing the sample in three regions according to the FastRed channel: a dark-red ROI, a light-pink ROI and a white ROI. ANDTool is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code and standalone versions are here available for download. USER MANUAL: see the specific PDF available in the Files section. REQUIREMENTS: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions. MAIN CONTACT: Filippo Piccinini (E-mail: filippo.piccinini85@gmail.com) -
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miRDiana
MATLAB package to find the miRNAs targeting a list of genes
To select miRNA target genes we developed software in MATLAB® (MathWorks®) called miRDiana that collects the union of mouse validated targets from the TargetScan, MicroCosm, mirTarBase and miRWalk 2.0 databases. Firstly, the software downloads each database and preprocesses by standardizing the miRNA and gene names. It strips the miRNA names from the species ids and converts the gene names to the official symbols of the National Center for Biotechnology Information (NCBI) database. ... -
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BWTT
BIOTACT Whisker Tracking Tool
The BWTT is an artefact of the EU Framework 7 Project BIOTACT 215910. It is an extensible software framework that runs under Matlab (Mathworks, TM) providing for the computation of whisker tracking algorithms for small mammal observation. Other tracking algorithms (e.g. snout tracking) can also be included. The software is released with a number of algorithms included, allowing rapid whisker tracking with no other software required (other than Matlab). -
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...If you draw the peritoneal line on the CT image, you can easily and fast obtain the abdominal circumference, the area of abdominal muscles, the area of subcutaneous fat and visceral fat. This program requires the installation of MATLAB compiler (MATLAB Complier (R2014a) Runtime 8.3) before running the program (BMI_CT_ver6.exe). You can download the complier program from the MathWorks Web site by navigating to http://www.mathworks.com/products/compiler/mcr/index.html Accuracy of the program was validated by manual measurement, Image J, and Aquarius program.
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MicroMos
To automatically obtain mosaics of partially overlapping images.
MicroMos is an open-source software tool written in MATLAB (The MathWorks, Inc., Massachusetts, USA), for automatically obtaining mosaics of partially overlapped images, also manually acquired. It was designed for stitching microscopy images, but thanks to the many parameters available it works also for other types of images. For more details, please, read: a) F. Piccinini, M. Pierini, E. -
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F-Tracker3D
A software tool for tracking fluorescent cells in 3D
...Then, the 3D track of each cell is obtained analysing the z-stacks and looking for the z-plane with the maximum intensity value for the different x-y positions previously determined. F-Tracker3D is written in MATLAB (©, The MathWorks, Inc., Massachusetts, USA) and the source code is freely provided. Requirements: MATLAB 2015a and Image Processing Toolbox 9.2 or later versions. -
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matImage
An image processing and analysis library for Matlab
MatImage is a Matlab library for image processing and analysis in 2D and 3D. It contains more than 250 fonctions for image enhancement, filtering, analysis, or visualisation, as well as for creating basic test shapes. It is built as a complement of the Mathworks image processing toolbox (IPT). Project is being transfered to GitHub: http://github.com/dlegland/matImage -
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oscmex
Open Sound Control for MATLAB
...oscmex comprises a set of "mex" binary routines, written in C, that can be loaded and called from MATLAB. The C code makes use of the liblo library (which is distributed under the terms of LGPL), and oscmex is also distributed under the same terms. oscmex is not endorsed by nor representative of MATLAB nor MathWorks. -
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Doxygen filters for these programming languages: R from GNU, q from kx.com, MatLab from MathWorks. These programs are implemented in C++ using Flex++. They provide full inline sources not just function definitions.
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The HapticAnalysis Package is a set of toolboxes for analysis of (1-dof bilateral) Haptic Teleoperation Systems. Symbolic math in GNU/Maxima, numerics in Mathworks Matlab. The teleoperator is analyzed using the H-matrix model.
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CDS plots and analyzes output from numerical climate models. It is capable of comparing climate model simulations and/or observational data. It consists mostly of a series of MathWorks Matlab language scripts and reads data in NetCDF format.
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The project aims to build a MATHWORKS MATLAB Simulink like IDE environment by utilizing the SystemC and GNU scientific library.
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MEX/JNI is a set of bindings between MATLAB and Java using Mathworks' External Interface API and Java Native Interface (JNI).
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