Search Results for "agilent"
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Showing 23 open source projects for "agilent"
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Visashot
A python screenshot script for vintage test & measurement instruments
...Visashot uses the VISA abstraction layer and associated libraries to access instruments over HP-IB (GP-IB), serial, ethernet and other supported interfaces. At the moment 120+ instruments are supported. So far most are from HP/Agilent/Keysight with a few extras from LeCroy. More brands models can be supported, please consider contributing! -
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altanalyze
Alternative splicing and functional prediction analysis tool
...AltAnalyze is compatible with any RNASeq data (exons and/or junctions), several Affymetrix splicing sensitive array types (Gene 1.0, Exon 1.0, junction) as well as many conventional array-types (e.g., Affymetrix, Illumina, Agilent). This software requires no advanced knowledge of bioinformatics programs or scripting. All you will need are your junction/exon read or microarray files along with some simple descriptions of the conditions that you're analyzing. RNASeq support is introduced in AltAnalyze 2.0. AltAnalyze documentation, installers are provided on this website as well as at http://www.altanalyze.org. ... -
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Vector network Analyzer (VNA)
Save Touchstone files and load calibration kits from HP & Agilent VNAs
Software for the control of HP, Agilent and Keysight vector network analyzer, such as the 8753, 8720 series using GPIB. Designed for Unix / Linux systems, using a National Instruments GPIB board. There are programs * 'vna' to save Touchstone files. * 'calkit' to upload calibration kit definitions to the VNA, including the properties of the shorts, opens and thrus. -
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Canvas-2DGC
A user-extensible Freemat based 1DGC and GCxGC data analysis software.
Canvas-2DGC is a user-extensible, Freemat based 1DGC and comprehensive 2DGC (GCxGC) data visualization and processing software. GCxGC-MS data analysis is supported for Agilent GCMS data format. The first goal of this project is to provide a highly intelligent analytical tool for reducing a complex chromatographic data analysis, either 1D or 2D, to just a few simple and intuitive steps. The second goal is to provide a fast and practical way of customizing or extending functionalities by ordinary users through high-level Freemat scripting. ... -
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tv16k7
trace viewer and bus decoders for data captured by Agilent 16700 LA
...The tool tries to be self descriptive and get as many information as possible from HP16700 for better documenting labor: e.g. test cases, spotted issues and so on. Keywords: Linux, C, C++, Qt, Qt4, Agilent/HP 16700 logic analyzer, Bus decoders (inverse assemblers), bus probing, bus protocol analyze -
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GNomEx
A Genomic LIMS and Data Repository
...The LIMS handles all aspects of the experiment from order through results delivery. Experiment platforms supported include Illumina HiSeq, MiSeq, iScan, ABI Sanger sequencing, Affy and Agilent Microarrays, Sequenom MassArray and Bioanalyzer. GNomEx is a web application with a Flash client user interface and a Java backend that runs on Apache Tomcat. MySQL is used for the database, although any modern RDBMS can be used. -
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Morpheus search algorithm
a mass spectrometry–based proteomics database search algorithm
Morpheus is a mass spectrometry–based proteomics database search algorithm designed from the ground up for high-resolution tandem mass spectra. We have discovered that for high-resolution MS/MS, simple spectrum preprocessing and scoring performs superior to more complex algorithms originally developed for low-resolution MS/MS, such as Sequest, Mascot, and OMSSA. Morpheus is also very fast—up to nearly 5 times faster than OMSSA for large human datasets. It is written in C# and is available... -
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Agilent Oligo sequence to fasta format
Extract Agilent oligo sequences to fasta format
Extracts sequences from a Agilent oligo sequence file to a fasta file using a list of IDs. Usage: sequences.py oligo-list_Agilent.txt query_ID_list.txt out_fasta.txt -
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Automated Microarray Data Analysis
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VXI-11 Ethernet Protocol
Communicate with LXI-compliant instruments from Linux over LAN
...This includes a wide range of instruments (including oscilloscopes, logic analysers, spectrum analysers, function generators, etc.) by a wide range of manufacturers (including Tektronix, Agilent, LeCroy, and Anritsu to name just four). An interactive "send and receive" utility is included as an example. You may want to build on to these libraries for your specific instruments. Basically, if you've got a Programmer's Reference for your instrument and this code, you should be able to cobble something together. -
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dmmutils
Linux and Windows utillity for Agilent U1230, U1240 and U1270 DMM
Command line utility for Agilent U1230, U1240 ans U1270 series digital multimeters (DMM). Both Linux and Windows are supported. So far only tested on U1252A, but the utillity do probably work with all the the following multimeters: Agilent U1231A, U1232A, U1233A, U1241A, U1242A, U1241B, U1242B, U1251A, U1252A, U1253A, U1251B, U1252B, U1253B, U1271A, U1272A, U1273A. -
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zephyr
Experiment automation
Zephyr is a script-driven experiment automation program that works various measurement instruments and actuators. It supports instruments from Agilent, Eco Physics, ICS Electronics, Keithley, Omega, Teledyne and other manufacturers. The script language is XML-based. Syntax highlighting is available. The source code is included in the distribution. Contact the project admin to get SVN access. -
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Agilent EasyEXPERT Hacks
Tools to automate some features in the wonderful software!
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Vlaxicon is an open-source tool for measurement instruments management. It allows remote control of various instruments such are Agilent generators and oscilloscopes, etc. It is lightweight alternative for Agilent VEE Pro software.
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EDGE3 is an open-source, web-based application allowing for the management, storage, analysis, and controlled sharing of transcription-based microarray data generated on the Agilent DNA platform.
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TiMAT2 contains tools for low and high level genomic tiling microarray analysis using the Affymetrix, NimbleGen, and Agilent platforms. It is designed for processing single and multi chip data sets from ChIP-Chip, RNA difference, and aCGH experiments.
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A web interface to easily retrieve annotation from different microarrays platforms.The annotation is provided by BioConductor. With this tool among others features we can also compare annotation from varius chip types (ie: Agilent ID to Affy ID etc)
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The jGpibEnet project is a 100% pure JAVA driver for interfacing an Ethernet to IEEE-488( GPIB ) controller. Current supported controllers: ICS 8065, Agilent E5810A. This project uses the "remotetea" project hosted here for ONC/RPC protocol.
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Reverberation Chamber remotization for network analyzer Agilent E5071B and Electric Field Probe HI-6005. SW enveloped and tested in the university of Ancona (Italy).
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CycleCnt is a client/server application that tracks vacuum activation cycles for In-Circuit Test (ICT) fixtures and testers, including HP 3070 (now Agilent 3070), GenRad 228X (now GR TestStation) and Teradyne Z1800 and Spectrum.
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